Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015804311.1_cds_XP_016488282.1_7864
CDS Infomation

[gene=LOC107808284] [db_xref=GeneID:107808284] [protein=DDT domain-containing protein DDR4-like] [protein_id=XP_016488282.1] [location=join(8432..8536,9728..9838,12946..13032,13116..13153,13267..13348,13532..13638,13706..13859,13938..14030,14171..14276,14731..14773,15588..16041)] [gbkey=CDS]
Sequence

ATGGAAATAGTAGCTTCAGCGCCGGAGTTGACGTCGGAAATGGAGCTCGTACGTCGTAAG
CTCCGTCAACGGTGGGAGTTAGCCTCTGTTTTAAACTTTCTCAACGTTTTTGAGCCGGTG
CTCGAAATCAAATTGAAAATTTCAGCTGAGGAGATAGAAACAGCCCTCATTGAGCCAAAT
GATACTCTTGCTCAGCTGCATATCATGCTTCTGAAGGGGATACCTCCTGTGAGTAAACTA
CTGAAGGATTCGAATCGATGGGTGATAGCATTAAGCAAGAAACTTGAAATGTGGTGGCCA
TGGGTTGCTGAAGGGACTTTTCCATTGACTGCAAAAAAGGGAGAGGAGATGGCCACATAC
AAGGCGCTCGATCCGGCAGTTCGCCTGCTTATTCTTAAAGCACTTTGTGAAATTCGAGCT
GATCAAGATGACGCCATATCTTACATTAACCATGAAACTAAAAGTAAAACTGATGCTTCT
GTTTTCCGTAAGGAGAAGCTTGGGGGCAATGGAGATGAAGTTTCATTCTGGTATGATGGG
AATGAAACTATTGGGCATAGATTATACAAGGAAGTTTGTCAAATTCAATCCATGTCAAAG
GTAAAGAATAAGAAAAGCATATCAGCTATCACTTCTCAGTGGGAGACACTTGCTACTACG
TTTGAAGAATTTCAAAATTTTGTGGAAGAGTTCTCATCAAGTCAAGTTAAATGGGAAGCT
GATGTGGGCAAGGCTGTTGAAGCTCATGCTATTCCTGCTCTTCAGAAAATTCAGAGGAAG
AAAGATATGGCTCTGAAGCGACAGCAAAGACTCGTAGAAAGCTTAAGAAACCTTGCAGTT
CCTCGTTCTTGCAGGATTCGTAGGCCAGTCAATTACAGATGCGATGATTTTGATAGAGCA
ATCAATGAGGCCATACAAGTAACAAACAAACGGAAGGCAATTGAAGAACCAACAAATGAA
ACTCAACTCAGTGAGCATGCGCCTAGGATTGGAACCATTTCCCTGGATTCCTCTCCAGCA
TCTAACTCCATAAGCAGTGATGCCACAGACAGTGAAACTGAGAGTGATGGGCCTCAAGGA
AGCAATGATGACGTTGATGATACCAGTGATGAGGTTGATGAAGCTGATCTTGATGAAGAT
GATACTGACTCAATGAAGGAAATTAACATAGCTGGCAACAGAAAGCAGTCAATGAATGAG
AATAGTCGCTTGGACTATAGGCCAAGCAGTTGTCGCTACAGTAAGCGGCTAGCTGGAGTT
GCTGGCTTTGCTGTTCCAGAAAGTACTCATATAGGTGCGAAAAATAGGTTGAGGCAAAGA
CCTACTGTCAATACTGCTGCTGAGTCTGTTGTCATTCCTGATTCAGAAGATGAAAACTGA

Peptide Sequence

PEP ID

XP_016488282.1
PEP Infomation

PREDICTED: DDT domain-containing protein DDR4-like [Nicotiana tabacum]
Sequence

MEIVASAPELTSEMELVRRKLRQRWELASVLNFLNVFEPVLEIKLKISAEEIETALIEPN
DTLAQLHIMLLKGIPPVSKLLKDSNRWVIALSKKLEMWWPWVAEGTFPLTAKKGEEMATY
KALDPAVRLLILKALCEIRADQDDAISYINHETKSKTDASVFRKEKLGGNGDEVSFWYDG
NETIGHRLYKEVCQIQSMSKVKNKKSISAITSQWETLATTFEEFQNFVEEFSSSQVKWEA
DVGKAVEAHAIPALQKIQRKKDMALKRQQRLVESLRNLAVPRSCRIRRPVNYRCDDFDRA
INEAIQVTNKRKAIEEPTNETQLSEHAPRIGTISLDSSPASNSISSDATDSETESDGPQG
SNDDVDDTSDEVDEADLDEDDTDSMKEINIAGNRKQSMNENSRLDYRPSSCRYSKRLAGV
AGFAVPESTHIGAKNRLRQRPTVNTAAESVVIPDSEDEN

Transcript Sequence

Gene sequence data has not been registered.